Protein Information

Protein ZmLBD9
ZmLBD9 is a protein in the LBD family.
Information
TF Name:	ZmLBD9
Species:	Maize
TF Family:	LBD
Gene Name(Synonym):	LBD9
Uniprot ID:	B6TET9
Subgenome:	1

Overview of domains present in v5 transcripts
	PF03195
Zm00001eb042180_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d032286	DAPseq	sequence	fimo	position
Zm00001d032286	DAPseq	sequence	fimo	position
Zm00001d032286	ChIPseq	sequence	fimo	position
Zm00001d032286	PChIPseq	sequence	fimo	position

Zm00001eb042180_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MTSTVSASQLHITATATGTSAVITTPSSNQNPINARSCHHSASSSPRSSTTTGGTGGGGGSGSGSTNQACAACKYQRRKC
SPDCPLAPYFPADQQRRFLNAHRLFGVSNILKTLKKLKPELCADAMGTLIYQSDMRAQDPVGGCYRLVLSLERQLEIDTA
ELTAVLHHLAFCRQATTTTTVMAPQQQGGGMADLDVTSSNQPLLPNEQQEVVDALYVNHEAHTAILQTDEVVHRHGGGHS
PTDDHHGEQQQQQLFDYFYYDATASDDASSKPTIDINLDNMQQFDFDDSCAAAEKVDLAPAAGDGEIRHHQHLDMNCQID
HKDYFEIKAASLVDAFDIRQDLQPVADVNAEVDIDIKTVDMNAGIGIDMKAMDMNANVDVNADLQGDDAAVNVSTCEAEA
AKMAAESSHCRLGLGFSSF

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF03195
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Nucleotide Sequence
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GTCTTTTAATAGGCATCACGAAGCT...

AC217910.3_FGT006 from maize genome v3

Related TFome: pUT5712

Amino Acid Sequence
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MTSTVSASQLHITATATGTSAVITTPSSNQNPINARSCHHSASSSPRSSTTTGGTGGGGGSGSGSTNQACAACKYQRRKC
SPDCPLAPYFPADQQRRFLNAHRLFGVSNILKTLKKLKPELCADAMGTLIYQSDMRAQDPVGGCYRLVLSLERQLEIDTA
ELTAVLHHLAFCRQATTTTTVMAPQQQGGGMADLDVTSSNQPLLPNEQQEVVDALYVNHEAHTAILQTDEVVHRHGGGHS
PTDDHHGEQQQQQLFDYFYYDATASDDASSKPTIDINLDNMQQFDFDDSCAAAEKVDLAPAAGDGEIRHHQHLDMNCQID
HKDYFEIKAASLVDAFDIRQDLQPVADVNAEVDIDIKTVDMNAGIGIDMKAMDMNANVDVNADLQGDDAAVNVSTCEAEA
AKMAAESSHCRLGLGFSSF

Nucleotide Sequence
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ATGACCTCCACCGTATCCGCTTCCC...

Zm00001d032286_T001 from maize genome v4

Amino Acid Sequence
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MTSTVSASQLHITATATGTSAVITTPSSNQNPINARSCHHSASSSPRSSTTTGGTGGGGGSGSGSTNQACAACKYQRRKC
SPDCPLAPYFPADQQRRFLNAHRLFGVSNILKTLKKLKPELCADAMGTLIYQSDMRAQDPVGGCYRLVLSLERQLEIDTA
ELTAVLHHLAFCRQATTTTTVMAPQQQGGGMADLDVTSSNQPLLPNEQQEVVDALYVNHEAHTAILQTDEVVHRHGGGHS
PTDDHHGEQQQQQLFDYFYYDATASDDASSKPTIDINLDNMQQFDFDDSCAAAEKVDLAPAAGDGEIRHHQHLDMNCQID
HKDYFEIKAASLVDAFDIRQDLQPVADVNAEVDIDIKTVDMNAGIGIDMKAMDMNANVDVNADLQGDDAAVNVSTCEAEA
AKMAAESSHCRLGLGFSSF

Nucleotide Sequence
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ATGACCTCCACCGTATCCGCTTCCC...

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Protein ZmLBD9

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmLBD9 is the regulator

Interactions where ZmLBD9 is the target
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Zm00001eb042180_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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AC217910.3_FGT006 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d032286_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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